Python Seq.most_common_baseの例

コード例 #1

from Seq1 import Seq
print('-----|Practice 1, Exercise 10|-----')
GENE_FOLDER = "./Sequences/"
gene_list = ["U5", "ADA", "FRAT1", "FXN", "RNU6_269P"]

for gene in gene_list:
    s1 = Seq()
    sequence = Seq.read_fasta(Seq, GENE_FOLDER + gene + ".txt")
    print("Gene", gene,": Most frequent base:", (Seq.most_common_base(Seq.count_genes(Seq))))

コード例 #2

ファイル: Ex10.py プロジェクト: jbriz2020/PNE-prqactices-j

from Seq1 import Seq

PROJECT_PATH = '../P0/sequences downloaded/'
gene_list = ['U5', 'ADA', 'FRAT1', 'FXN']

print('----- Practice 1, Exercise 10 -----')

for gene in gene_list:
    sequence = Seq()
    sequence.read_fasta(PROJECT_PATH + gene)
    print('Gene', gene, ': Most frequent base:',
          (Seq.most_common_base(Seq.count(sequence))))