def togff(self, gff={}): """ Overrides SpliceSiteBase.togff() Takes care for proper fstart and fstop setting """ self._gff['fstart'] = self.pos - 1 self._gff['fstop'] = self.pos return SpliceSiteBase.togff(self, gff=gff)
def togff(self,gff={}): """ Overrides SpliceSiteBase.togff() Takes care for proper fstart and fstop setting """ self._gff['fstart'] = self.pos-1 self._gff['fstop'] = self.pos return SpliceSiteBase.togff(self,gff=gff)
def togff(self, gff={}): """ Overrides SpliceSiteBase.togff() Takes care for proper fstart and fstop setting """ self._gff['fstart'] = self.pos + 1 self._gff['fstop'] = self.pos + 2 if not self.is_canonical(): if not self._gff.has_key('column9data'): self._gff['column9data'] = {} self._gff['column9data']['Non-canonical'] = self.donor # return basal pliceSiteBase.togff() function return SpliceSiteBase.togff(self, gff=gff)
def togff(self,gff={}): """ Overrides SpliceSiteBase.togff() Takes care for proper fstart and fstop setting """ self._gff['fstart'] = self.pos+1 self._gff['fstop'] = self.pos+2 if not self.is_canonical(): if not self._gff.has_key('column9data'): self._gff['column9data'] = {} self._gff['column9data']['Non-canonical'] = self.donor # return basal pliceSiteBase.togff() function return SpliceSiteBase.togff(self,gff=gff)