def validate_input_files(self): if not count.files_have_min_reads(self.input_files_local[0][0:2], 1): self.input_file_error = InputFileErrors.INSUFFICIENT_READS
def validate_input_files(self): if not count.files_have_min_reads(self.input_files_local[0], 2): raise InsufficientReadsError( "Insufficient reads before idseq-dedup")
def validate_input_files(self): if not count.files_have_min_reads(self.input_files_local[0][0:2], 1): raise InsufficientReadsError("Insufficient reads")
def validate_input_files(self): # first two files are gsnap_filter_1.fa and gsnap_filter_2.fa if not count.files_have_min_reads(self.input_files_local[0][:-1], 1): self.input_file_error = InputFileErrors.INSUFFICIENT_READS
def validate_input_files(self): # first two files are gsnap_filter_1.fa and gsnap_filter_2.fa if not count.files_have_min_reads(self.input_files_local[0][:-1], 1): raise InsufficientReadsError("Insufficient reads")
def validate_input_files(self): if not count.files_have_min_reads(self.input_fas(), 1): raise InsufficientReadsError("Insufficient reads before bowtie2")