def load_havug_cxs(convert_ensg=True): fname = ut.proj_path('havug_cxs') u2e = ut.dict_inverse_sets(ut.load_dict_sets( '../../data/convert/Hs2Hs_uni.tab')) hcxs = ut.load_list_of_type(fname,set) if convert_ensg: hcxs = convert_complexes([(i,c) for i,c in enumerate(hcxs)], u2e, seqs.load_prots_from_fasta('../../data/sequences/canon/Hs.fasta')) return hcxs
def all_genes(sp): ps = seqs.load_prots_from_fasta('../../data/sequences/canon/%s.fasta' % sp) return ps