def setUp(self):
self.infile = data_path('test.sff')
with open(data_path('test.raw')) as fp:
self.expected = list(fp)[1:]
def setUp(self):
self.fa_path = data_path("test.fa")
self.dat_path = data_path("test.dat")
self.raw_path = data_path("test.raw")
def setUp(self):
self.pnoise_fp = open(data_path('test-pnoise.mapping'))
self.snoise_fp = open(data_path('test-snoise.mapping'))
def setUp(self):
self.fa_path = data_path('test.fa')
self.dat_path = data_path('test.dat')
self.raw_path = data_path('test.raw')
def setUp(self):
self.sff_path = data_path('test.sff')
self.expected_path = data_path('test-pnoise_cd.fa',)
self.mapping_path = data_path('test-pnoise.mapping')
with open(self.expected_path) as fp:
self.expected = list(fp)
def setUp(self):
self.infile = data_path('test.sff')
with open(data_path('test.raw')) as fp:
self.expected = list(fp)[1:]
def setUp(self):
self.pnoise_fp = open(data_path('test-pnoise.mapping'))
self.snoise_fp = open(data_path('test-snoise.mapping'))
