def setRoisarray(self, rois, img) :
self.__roisArray=[]
self.__roisArray+=rois
self.__image=img
self.__firstslice=img.getSlice()
self.__ranges={}
self.__test="ok"
Roi.setColor(Color.BLUE)
def __init__(self, rois, img): #constructor initialize a private rois array
self.__roisArray=[]
self.__roisArray+=rois
self.__image=img
self.__firstslice=img.getSlice()
self.__ranges={}
self.__test="ok"
Roi.setColor(Color.BLUE)
self.__setMaxValues()
def save_roi_set(imp=IJ.getImage()):
img_dir, name = get_file_info()
roi_dir = make_roi_dir(img_dir, name)
roi_path = make_roi_path(roi_dir, name)
Roi.setColor(Color.blue)
rm = RoiManager().getInstance()
rm.deselect()
rm.runCommand("Save", roi_path)
ol = imp.getOverlay()
if ol is None:
ol = Overlay()
for roi in rm.getRoisAsArray():
ol.add(roi)
imp.setOverlay(ol)
rm.runCommand("delete")
ol.setStrokeColor(Color.blue)
Roi.setColor(Color.yellow)
