示例#1
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def postprocess_alignment_to_rec(*args):
    default_keys = [
        "config__algorithm__coverage_interval",
        "config__algorithm__seq2c_bed_ready", "config__algorithm__coverage",
        "config__algorithm__coverage_merged",
        "config__algorithm__coverage_orig",
        "config__algorithm__variant_regions",
        "config__algorithm__variant_regions_merged",
        "config__algorithm__variant_regions_orig"
    ]
    return cwlutils.to_rec(*args, default_keys=default_keys)
示例#2
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def process_alignment_to_rec(*args):
    return cwlutils.to_rec(*args)
示例#3
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def prep_samples_to_rec(*args):
    return cwlutils.to_rec(*args)
示例#4
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def hla_to_rec(*args):
    return cwlutils.to_rec(*args)
示例#5
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def prep_samples_to_rec(*args):
    return cwlutils.to_rec(*args)
示例#6
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def postprocess_alignment_to_rec(*args):
    default_keys = ["config__algorithm__coverage_interval", "config__algorithm__seq2c_bed_ready",
                    "config__algorithm__coverage", "config__algorithm__coverage_merged",
                    "config__algorithm__coverage_orig", "config__algorithm__variant_regions",
                    "config__algorithm__variant_regions_merged", "config__algorithm__variant_regions_orig"]
    return cwlutils.to_rec(*args, default_keys=default_keys)
示例#7
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def process_alignment_to_rec(*args):
    return cwlutils.to_rec(*args)
示例#8
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def hla_to_rec(*args):
    return cwlutils.to_rec(*args)