示例#1
0
    # ILLUMINA FUNCTIONS
    #
    # usage: biochem_utils.py fcnum ilmnDeblock
    elif method == 'ilmnDeblock':
        biochem.runILMNDeblock(int(sys.argv[1]), sys.argv[3])

    # usage: biochem_utils.py fcnum ilmnCycle
    elif method == 'ilmnCycle':
        biochem.runILMNCycle(int(sys.argv[1]), sys.argv[3])


    # usage: biochem_utils.py fcnum illumina
    elif method == 'illumina':
        biochem.runILMNDeblock(int(sys.argv[1]), sys.argv[3])
        biochem.runILMNCycle(int(sys.argv[1]), sys.argv[4])


    # usage: biochem_utils.py fcnum ilmnHyb
    elif method == 'ilmnHyb':
        biochem.runILMNHyb(int(sys.argv[1]), sys.argv[3])




    else:
        print '\nWARN\t ---\t-\t--> Error: not correct method ' + \
              'input!\nWARN\t ---\t-\t--> Double check method name ' + \
              '(2nd argument)\n'
        sys.exit()