def test_get_3prime_utr_length_CTNNB1(): transcript_id = "ENST00000405570" exons = ensembl.get_exons_from_transcript(transcript_id) utr_length = ensembl.get_three_prime_utr_length(exons) print utr_length assert(utr_length == 11)
def test_get_3prime_utr_length_reverse_strand_CASP9(): transcript_id = "ENST00000333868" exons = ensembl.get_exons_from_transcript(transcript_id) utr_length = ensembl.get_three_prime_utr_length(exons, forward = False) print utr_length assert(utr_length == 673)
def test_get_3prime_utr_length_RET(): transcript_id = "ENST00000355710" exons = ensembl.get_exons_from_transcript(transcript_id) utr_length = ensembl.get_three_prime_utr_length(exons) print utr_length assert(utr_length == 2082)