Beispiel #1
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class SimpleGzipInfoTestCase(InfoMixin, unittest.TestCase):
    seq_file = data_path('input2.fasta.gz')
Beispiel #2
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class SimpleBzip2InfoTestCase(InfoMixin, unittest.TestCase):
    seq_file = data_path('input2.fasta.bz2')
Beispiel #3
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class MultithreadedInfoTestCase(InfoMixin, unittest.TestCase):
    seq_file = data_path('input2.fasta')
    threads = 2
Beispiel #4
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class GzipExtractIdsTestCase(ExtractIdsMixin, unittest.TestCase):
    seq_file = data_path('input2.fasta.gz')
Beispiel #5
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class Bz2ExtractIdsTestCase(ExtractIdsMixin, unittest.TestCase):
    seq_file = data_path('input2.fasta.bz2')
Beispiel #6
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class SimpleExtractIdsTestCase(ExtractIdsMixin, unittest.TestCase):
    seq_file = data_path('input2.fasta')
Beispiel #7
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class MogrifyGzipInputTestCase(CommandLineTestMixIn,
                               test_convert.GzipInputConvertTestCase):
    command = 'mogrify {input}'
    expected_path = data_path('output2.fasta')
    out_suffix = 'fasta.gz'