def filterCenterProperties(fN, fFN):
NX = Nexus(fN, fFN)
NX.load(['query', 'reference', 'qStart', 'qEnd', 'rStart', 'rEnd', 'qLen', 'rLen', 'sigMask', 'centerPass', 'mismatchPass'])
while NX.nextID():
qRange = [NX.qStart, NX.qEnd]
rRange = [NX.rStart, NX.rEnd]
NX.mismatchPass = checkMismatchCenter(NX.query, NX.reference, NX.qLen, NX.rLen, qRange, rRange, NX.sigMask)
NX.centerPass = checkPeakCenter(NX.query, NX.reference, NX.qLen, NX.rLen, qRange, rRange)
NX.save()
def filterCenterProperties(fN, fFN):
NX = Nexus(fN, fFN)
NX.load([
'query', 'reference', 'qStart', 'qEnd', 'rStart', 'rEnd', 'qLen',
'rLen', 'sigMask', 'centerPass', 'mismatchPass'
])
while NX.nextID():
qRange = [NX.qStart, NX.qEnd]
rRange = [NX.rStart, NX.rEnd]
NX.mismatchPass = checkMismatchCenter(NX.query, NX.reference, NX.qLen,
NX.rLen, qRange, rRange,
NX.sigMask)
NX.centerPass = checkPeakCenter(NX.query, NX.reference, NX.qLen,
NX.rLen, qRange, rRange)
NX.save()
